{
  "_id": "6a1e758c1d7bb097a0a63b91",
  "Package": "hommel",
  "Type": "Package",
  "Title": "Methods for Closed Testing with Simes Inequality, in Particular\nHommel's Method",
  "Version": "1.8",
  "Date": "2025-01-14",
  "Author": "Jelle Goeman [aut, cre], Rosa Meijer [aut], Thijmen Krebs [aut]",
  "Authors@R": "c(person(given = \"Jelle\",\nfamily = \"Goeman\",\nrole = c(\"aut\", \"cre\"),\nemail = \"j.j.goeman@lumc.nl\"),\nperson(given = \"Rosa\",\nfamily = \"Meijer\",\nrole = \"aut\"),\nperson(given = \"Thijmen\",\nfamily = \"Krebs\",\nrole = \"aut\"))",
  "Maintainer": "Jelle Goeman <j.j.goeman@lumc.nl>",
  "Description": "Provides methods for closed testing using Simes local\ntests. In particular, calculates adjusted p-values for Hommel's\nmultiple testing method, and provides lower confidence bounds\nfor true discovery proportions. A robust but more conservative\nvariant of the closed testing procedure that does not require\nthe assumption of Simes inequality is also implemented. The\nmethods have been described in detail in Goeman et al\n(Biometrika 106, 841-856, 2019).",
  "License": "GPL (>= 2)",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-01 08:30:37 UTC",
    "User": "root"
  },
  "Encoding": "UTF-8",
  "RoxygenNote": "7.1.2.9000",
  "Repository": "https://jellegoeman.r-universe.dev",
  "Date/Publication": "2025-01-14 17:31:37 UTC",
  "RemoteUrl": "https://github.com/cran/hommel",
  "RemoteRef": "HEAD",
  "RemoteSha": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
  "MD5sum": "5046d2d0283351de5ef6bc9240aaa75e",
  "_user": "jellegoeman",
  "_type": "src",
  "_file": "hommel_1.8.tar.gz",
  "_fileid": "a059bd8169e1837aad048a3ed57b2ebd706752edc72fe6baa869017896e794c2",
  "_filesize": 118785,
  "_sha256": "a059bd8169e1837aad048a3ed57b2ebd706752edc72fe6baa869017896e794c2",
  "_created": "2026-06-01T08:30:37.000Z",
  "_published": "2026-06-02T06:17:48.401Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79010899876,
      "time": 126,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7326852412"
    },
    {
      "job": 79010899635,
      "time": 126,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7326852798"
    },
    {
      "job": 79010900075,
      "time": 135,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326855407"
    },
    {
      "job": 79010900251,
      "time": 128,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326853296"
    },
    {
      "job": 79010900409,
      "time": 147,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7326852997"
    },
    {
      "job": 79010900172,
      "time": 348,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7326912488"
    },
    {
      "job": 79010900137,
      "time": 159,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326854994"
    },
    {
      "job": 79010899716,
      "time": 374,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326925247"
    },
    {
      "job": 79010899082,
      "time": 163,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326811760"
    },
    {
      "job": 79010899843,
      "time": 98,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326844225"
    },
    {
      "job": 79010899284,
      "time": 128,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7350333381"
    },
    {
      "job": 79010900276,
      "time": 124,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7326852138"
    },
    {
      "job": 79010899922,
      "time": 131,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326854183"
    }
  ],
  "_buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/hommel",
  "_commit": {
    "id": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
    "author": "Jelle Goeman <j.j.goeman@lumc.nl>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.8\n",
    "time": 1736875897
  },
  "_maintainer": {
    "name": "Jelle Goeman",
    "email": "j.j.goeman@lumc.nl",
    "login": "jellegoeman",
    "description": "",
    "uuid": 24312915
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 12,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "jellegoeman",
      "count": 8,
      "uuid": 24312915
    }
  ],
  "_userbio": {
    "uuid": 24312915,
    "type": "user",
    "name": "jellegoeman"
  },
  "_downloads": {
    "count": 550,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/hommel"
  },
  "_searchresults": 26,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/hommel.html",
    "manual.pdf"
  ],
  "_realowner": "jellegoeman",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2017-05-16"
    },
    {
      "version": "1.1",
      "date": "2017-07-12"
    },
    {
      "version": "1.2",
      "date": "2018-11-15"
    },
    {
      "version": "1.3",
      "date": "2019-08-19"
    },
    {
      "version": "1.4",
      "date": "2019-10-02"
    },
    {
      "version": "1.5",
      "date": "2019-12-02"
    },
    {
      "version": "1.6",
      "date": "2021-12-17"
    },
    {
      "version": "1.8",
      "date": "2025-01-17"
    }
  ],
  "_exports": [
    "concentration",
    "discoveries",
    "fdp",
    "hommel",
    "localtest",
    "p.adjust",
    "show",
    "summary",
    "tdp"
  ],
  "_help": [
    {
      "page": "hommel-package",
      "title": "Methods for closed testing with Simes inequality, in particular Hommel's method",
      "topics": [
        "hommel-package"
      ]
    },
    {
      "page": "concentration-function",
      "title": "Concentration set calculation",
      "topics": [
        "concentration"
      ]
    },
    {
      "page": "hommel-function",
      "title": "Calculates adjusted p-values of Hommel's method efficiently.",
      "topics": [
        "hommel"
      ]
    },
    {
      "page": "hommel-class",
      "title": "Class \"hommel\" for storing the result of Hommel's multiple testing method.",
      "topics": [
        "hommel-class",
        "p.adjust,hommel-method",
        "show,hommel-method",
        "summary,hommel-method"
      ]
    },
    {
      "page": "localtest-function",
      "title": "P-values and adjusted p-values of local tests",
      "topics": [
        "localtest"
      ]
    },
    {
      "page": "fdp-function",
      "title": "Confidence bounds for the number of discoveries",
      "topics": [
        "discoveries",
        "fdp",
        "tdp"
      ]
    }
  ],
  "_rundeps": [
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 2.971275848738105,
  "_indexed": true,
  "_nocasepkg": "hommel",
  "_universes": [
    "jellegoeman"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.8",
      "date": "2026-06-01T08:32:52.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "e538ee9ff06cf395a5da99a350bb32f5a3152912a89c1b14b956a2c6c4df6081",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.8",
      "date": "2026-06-01T08:32:52.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "ad6606dc2defbb14aa0543c54d28a3b659d3b94b607d28529e6fdc04c25da569",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.8",
      "date": "2026-06-01T08:33:03.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "24d9c73f5998086d6a8678514be4fa98520f1c9effb828b53543c3caff44d5dd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.8",
      "date": "2026-06-01T08:32:52.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "3a3a3e2827ff396006bced6434f1c827da082ed5e3825c7ce9d8d500634c2b07",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.8",
      "date": "2026-06-01T08:33:01.000Z",
      "arch": "aarch64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "8de6839bb84e3c512924c9493ad7f08a0626c6de2b2ac607cde79c7ffccd7487",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.8",
      "date": "2026-06-01T08:35:26.000Z",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "4e3748125eecafb4965d8c5385f7edd8c7ed5208ab1812fb918ec7429c7901a2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.8",
      "date": "2026-06-01T08:33:05.000Z",
      "arch": "aarch64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "fd670eddfc8a5a9fb6fa80884c331358975da8d8a9b3f2764788d40f50ce794f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.8",
      "date": "2026-06-01T08:35:43.000Z",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "f92c88b915ddf81d94b32f0632c6e32fffa627fcaa67fa9b6fd0a682c793cf0c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.8",
      "date": "2026-06-01T08:32:47.000Z",
      "arch": "emscripten",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "58f8804940de83f0f453ee7d9cb0c0a753db7e7d797d83f532d967b87b4afb2b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.8",
      "date": "2026-06-02T06:16:18.000Z",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "d4b524cb9acd4dd844606cd5280d8f45c1c33ecc40c7439337963b3ffb0b8aec",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.8",
      "date": "2026-06-01T08:32:18.000Z",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "a2f32f4c02d24d07863e6db38675f9ed76cd828adf422500302ce38c46f571c6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.8",
      "date": "2026-06-01T08:32:18.000Z",
      "arch": "x86_64",
      "commit": "7bba4e3ddb1284f9b2e8594b9bb2e4ec229cbf5a",
      "fileid": "2c9d9a3f588aea2ac1b447b235a341bcaa17ea605dfff117f5daf45755912cf9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jellegoeman/actions/runs/26743818416"
    }
  ]
}